RefSeq | GCF_000230995.2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NC_019973.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, proteobacteria, alphaproteobacteria, hyphomicrobiales, phyllobacteriaceae, mesorhizobium. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI97010048 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 854 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.447307 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 6200312..631 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaa
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
-CATCGCCTTTTCAGGACGATCTTCTTCGAACCCGGCCGATCGCGCCGGGTTTTTTCGTTTGCCGGCAAGTACTTAAAAAGAATAGCCGCAGACAGCCCCAAGTGCAGATTCCCGAGTGCGAAATGATTTGCCGGCACATACATGCCCGCTGATGACCGGCACGCTTGAAAAGCGCCGACTGAAAAGACTACGCTCCGCACAAATAGCTATTTTTTTTCAAGCGGTTAGCGACAGTCATCCACAGCTTGTCCACAACGCGCCGAAGAGACGGGAGGACAACTGGCTGTCAAGTGAATTATTTCAGAAAATTTCGCGCCGGCCCGGCTTTTTCATATTCGTCGGAAAAGGGTTTGAATCCCAATGGCTTTGTCAAAATATGCCGCTGCGGCATGGCGCTCCAACCTGCCCGAGGTAACCAGATTCCTTAAAAATCCGTTAGACGTGGCCTTGCCCTATCCACAGCGATTTCGGTAATGTCGATCTATCGAACGGGACGGGCCTCTGGCCCTAACCCAGCCTTACGCGGCCAGCTTAAATTGGCGGGATTTGCGACGTGGATCAAGTCCGCGAACGGGTATGGTTTGCTCTTTTTCGATACGGTAGGGGACTGGCGTAACTAGACATGGCAGGTAGGACGGCGCGCCGGCGCTCTTTCGCCGGACGGTGTTGTATTGCCCTGACATACCCAACGCGGACTGGCTTCCATGGGCCGGCACCGGTTCCCGTCGGATAGTGGGCGACGTTCATTGCCGGCGGCGGCAATGGGCATCGTAGCGAAGACACGGTCGCCGGAAAAGGATGCAGGAGGCGCATCCCCAGCGAAAAACAGGTACAGAAAGGCAAGGAACTCGATCdnaA
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC   CtrA binding motif Fis binding site IHF binding site |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The information of repeat sequences |
Motif YTTTTTC
Motif WTTGCCGGVAHATRC
Motif CGNCKGAAAAG
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of genes on leading or lagging strand | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of nucleotide on leading or lagging strand | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
|