DEG database

Organism Porphyromonas gingivalis ATCC 33277
RefSeq NC_010729
Essential Genes 281
Non-essential Genes 1808
Method Method
Medium Rich medium
Pubmed 26358096
Reference Hutcherson, Justin A., et al (2015). Comparison of inherently essential genes of Porphyromonas gingivalis identified in two transposon sequencing libraries. Molecular Oral Microbiology.
Distribution of essential genes on leading or lagging strand
Distribution of essential genes cellular location
Search by Sequence (BLAST)
organism in bacteria
No. DEG ID Gene Name Function Organism
1 DEG10390001 - phosphatidate cytidylyltransferase Porphyromonas gingivalis ATCC 33277
2 DEG10390002 - transmembrane AAA-metalloprotease FtsH Porphyromonas gingivalis ATCC 33277
3 DEG10390003 - tryptophanyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
4 DEG10390004 - 3-oxoacyl-ACP synthase Porphyromonas gingivalis ATCC 33277
5 DEG10390005 engA GTP-binding protein EngA Porphyromonas gingivalis ATCC 33277
6 DEG10390006 - leucine aminopeptidase precursor Porphyromonas gingivalis ATCC 33277
7 DEG10390007 - lipid A disaccharide synthase Porphyromonas gingivalis ATCC 33277
8 DEG10390008 surE stationary phase survival protein SurE Porphyromonas gingivalis ATCC 33277
9 DEG10390009 - hypothetical protein Porphyromonas gingivalis ATCC 33277
10 DEG10390010 - glycyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
11 DEG10390011 gpmA phosphoglyceromutase Porphyromonas gingivalis ATCC 33277
12 DEG10390012 - magnesium transporter Porphyromonas gingivalis ATCC 33277
13 DEG10390013 ksgA dimethyladenosine transferase Porphyromonas gingivalis ATCC 33277
14 DEG10390014 - aminoacyl-histidine dipeptidase Porphyromonas gingivalis ATCC 33277
15 DEG10390015 - malonyl CoA-ACP transacylase Porphyromonas gingivalis ATCC 33277
16 DEG10390016 - ParB chromosome partitioning protein Porphyromonas gingivalis ATCC 33277
17 DEG10390017 secG preprotein translocase subunit SecG Porphyromonas gingivalis ATCC 33277
18 DEG10390018 - hypothetical protein Porphyromonas gingivalis ATCC 33277
19 DEG10390019 - signal recognition particle-docking protein Porphyromonas gingivalis ATCC 33277
20 DEG10390020 aspS aspartyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
21 DEG10390021 - riboflavin biosynthesis protein Porphyromonas gingivalis ATCC 33277
22 DEG10390022 - peptidyl-tRNA hydrolase Porphyromonas gingivalis ATCC 33277
23 DEG10390023 rplY 50S ribosomal protein L25 Porphyromonas gingivalis ATCC 33277
24 DEG10390024 metG methionyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
25 DEG10390025 - hypothetical protein Porphyromonas gingivalis ATCC 33277
26 DEG10390026 - undecaprenyl pyrophosphate synthase Porphyromonas gingivalis ATCC 33277
27 DEG10390027 - hypothetical protein Porphyromonas gingivalis ATCC 33277
28 DEG10390028 - hypothetical protein Porphyromonas gingivalis ATCC 33277
29 DEG10390029 rnpA ribonuclease P Porphyromonas gingivalis ATCC 33277
30 DEG10390030 - uroporphyrinogen-III synthase Porphyromonas gingivalis ATCC 33277
31 DEG10390031 - hypothetical protein Porphyromonas gingivalis ATCC 33277
32 DEG10390032 infB translation initiation factor IF-2 Porphyromonas gingivalis ATCC 33277
33 DEG10390033 - ABC transporter ATP-binding protein Porphyromonas gingivalis ATCC 33277
34 DEG10390034 argS arginyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
35 DEG10390035 mnmA tRNA-specific 2-thiouridylase MnmA Porphyromonas gingivalis ATCC 33277
36 DEG10390036 - single-stranded binding protein Porphyromonas gingivalis ATCC 33277
37 DEG10390037 - hypothetical protein Porphyromonas gingivalis ATCC 33277
38 DEG10390038 - hypothetical protein Porphyromonas gingivalis ATCC 33277
39 DEG10390039 - DNA-binding/iron metalloprotein/AP endonuclease Porphyromonas gingivalis ATCC 33277
40 DEG10390040 - ABC transporter ATP-binding protein MsbA family Porphyromonas gingivalis ATCC 33277
41 DEG10390041 - hypothetical protein Porphyromonas gingivalis ATCC 33277
42 DEG10390042 gyrB DNA gyrase B subunit Porphyromonas gingivalis ATCC 33277
43 DEG10390043 - dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis Porphyromonas gingivalis ATCC 33277
44 DEG10390044 - DNA topoisomerase IV subunit A Porphyromonas gingivalis ATCC 33277
45 DEG10390045 - hypothetical protein Porphyromonas gingivalis ATCC 33277
46 DEG10390046 - hypothetical protein Porphyromonas gingivalis ATCC 33277
47 DEG10390047 - methylmalonyl-CoA decarboxylase alpha subunit Porphyromonas gingivalis ATCC 33277
48 DEG10390048 - hypothetical protein Porphyromonas gingivalis ATCC 33277
49 DEG10390049 - hypothetical protein Porphyromonas gingivalis ATCC 33277
50 DEG10390050 - lipoprotein signal peptidase Porphyromonas gingivalis ATCC 33277
51 DEG10390051 - DnaK suppressor protein Porphyromonas gingivalis ATCC 33277
52 DEG10390052 ileS isoleucyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
53 DEG10390053 - hypothetical protein Porphyromonas gingivalis ATCC 33277
54 DEG10390054 gltX glutamyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
55 DEG10390055 - 3-deoxy-D-manno-octulosonic-acid transferase Porphyromonas gingivalis ATCC 33277
56 DEG10390056 - glucose-1-phosphate thymidylyltransferase Porphyromonas gingivalis ATCC 33277
57 DEG10390057 - dTDP-4-dehydrorhamnose 3,5-epimerase Porphyromonas gingivalis ATCC 33277
58 DEG10390058 - dTDP-4-dehydrorhamnose reductase Porphyromonas gingivalis ATCC 33277
59 DEG10390059 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase Porphyromonas gingivalis ATCC 33277
60 DEG10390060 queA S-adenosylmethionine:tRNA ribosyltransferase-isomerase Porphyromonas gingivalis ATCC 33277