DEG database

Organism Porphyromonas gingivalis ATCC 33277
RefSeq NC_010729
Essential Genes 281
Non-essential Genes 1808
Method Method
Medium Rich medium
Pubmed 26358096
Reference Hutcherson, Justin A., et al (2015). Comparison of inherently essential genes of Porphyromonas gingivalis identified in two transposon sequencing libraries. Molecular Oral Microbiology.
Distribution of essential genes on leading or lagging strand
Distribution of essential genes cellular location
Search by Sequence (BLAST)
organism in bacteria
No. DEG ID Gene Name Function Organism
241 DEG10390241 rplF 50S ribosomal protein L6 Porphyromonas gingivalis ATCC 33277
242 DEG10390242 rpsN 30S ribosomal protein S14 Porphyromonas gingivalis ATCC 33277
243 DEG10390243 rplE 50S ribosomal protein L5 Porphyromonas gingivalis ATCC 33277
244 DEG10390244 rplX 50S ribosomal protein L24 Porphyromonas gingivalis ATCC 33277
245 DEG10390245 rpsQ 30S ribosomal protein S17 Porphyromonas gingivalis ATCC 33277
246 DEG10390246 rplP 50S ribosomal protein L16 Porphyromonas gingivalis ATCC 33277
247 DEG10390247 rpsC 30S ribosomal protein S3 Porphyromonas gingivalis ATCC 33277
248 DEG10390248 rpsS 30S ribosomal protein S19 Porphyromonas gingivalis ATCC 33277
249 DEG10390249 rplB 50S ribosomal protein L2 Porphyromonas gingivalis ATCC 33277
250 DEG10390250 rplW 50S ribosomal protein L23 Porphyromonas gingivalis ATCC 33277
251 DEG10390251 rplD 50S ribosomal protein L4 Porphyromonas gingivalis ATCC 33277
252 DEG10390252 rplC 50S ribosomal protein L3 Porphyromonas gingivalis ATCC 33277
253 DEG10390253 - elongation factor G Porphyromonas gingivalis ATCC 33277
254 DEG10390254 rpsG 30S ribosomal protein S7 Porphyromonas gingivalis ATCC 33277
255 DEG10390255 rpsL 30S ribosomal protein S12 Porphyromonas gingivalis ATCC 33277
256 DEG10390256 - glutaminyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
257 DEG10390257 - hypothetical protein Porphyromonas gingivalis ATCC 33277
258 DEG10390258 - NAD dependent epimerase Porphyromonas gingivalis ATCC 33277
259 DEG10390259 - hypothetical protein Porphyromonas gingivalis ATCC 33277
260 DEG10390260 - signal peptidase I Porphyromonas gingivalis ATCC 33277
261 DEG10390261 - hypothetical protein Porphyromonas gingivalis ATCC 33277
262 DEG10390262 fmt methionyl-tRNA formyltransferase Porphyromonas gingivalis ATCC 33277
263 DEG10390263 - cell-cycle protein Porphyromonas gingivalis ATCC 33277
264 DEG10390264 dapA dihydrodipicolinate synthase Porphyromonas gingivalis ATCC 33277
265 DEG10390265 - hypothetical protein Porphyromonas gingivalis ATCC 33277
266 DEG10390266 - nicotinate phosphoribosyltransferase Porphyromonas gingivalis ATCC 33277
267 DEG10390267 nadD nicotinic acid mononucleotide adenylyltransferase Porphyromonas gingivalis ATCC 33277
268 DEG10390268 - bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase Porphyromonas gingivalis ATCC 33277
269 DEG10390269 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Porphyromonas gingivalis ATCC 33277
270 DEG10390270 prfA peptide chain release factor 1 Porphyromonas gingivalis ATCC 33277
271 DEG10390271 - hemagglutinin Porphyromonas gingivalis ATCC 33277
272 DEG10390272 pheT phenylalanyl-tRNA synthetase subunit beta Porphyromonas gingivalis ATCC 33277
273 DEG10390273 - hypothetical protein Porphyromonas gingivalis ATCC 33277
274 DEG10390274 - hypothetical protein Porphyromonas gingivalis ATCC 33277
275 DEG10390275 - glycerol-3-phosphate cytidylyltransferase Porphyromonas gingivalis ATCC 33277
276 DEG10390276 - 4-hydroxythreonine-4-phosphate dehydrogenase Porphyromonas gingivalis ATCC 33277
277 DEG10390277 - hypothetical protein Porphyromonas gingivalis ATCC 33277
278 DEG10390278 hisS histidyl-tRNA synthetase Porphyromonas gingivalis ATCC 33277
279 DEG10390279 thyA thymidylate synthase Porphyromonas gingivalis ATCC 33277
280 DEG10390280 - 1-deoxy-D-xylulose-5-phosphate synthase Porphyromonas gingivalis ATCC 33277
281 DEG10390281 - acetyltransferase Porphyromonas gingivalis ATCC 33277