RefSeq NC_012589.1
DoriC accession number aORI10010064
OriC length 453 nt
OriC AT content 0.7307
The location of oriC region 386..838 nt
Browse in NCBI
OriC map
OriC sequences
ATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTTTACTTAAATATGTGTCGATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTTTACTTAAATATGTGTCGATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTTTACTTAAATATGTGTCGATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ORB     AT-rich region
The information of repeat sequences

Motif SGRAWCWGG

StartP-valueSite
4231.97e-06TACAGTCATAGGAAACAGGTTTAACAGTA
1721.97e-06AGATATCTTTCGGATCTGGTAAACTCGCC

Motif ACAKTASA

StartP-valueSite
4368.59e-06AACAGGTTTAACAGTAGAAACATTAGAA
2451.83e-05TTATTTGCCTACAGTACAAGTTGTTTCG
4454.69e-05AACAGTAGAAACATTAGAA

Motif AGMCGT

StartP-valueSite
1184.32e-05AGTCTACCTTAGCCGTCTCTTTTTCA
921.35e-04GATGGTAATCAGACGTATGTTTATAA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010088 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010064 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010076 99.117 453 2 2 3 453 1 453 0.0 813
aORI10010070 99.117 453 3 1 1 453 2 453 0.0 813
aORI10010067 98.896 453 4 1 1 453 2 453 0.0 808
aORI10010073 98.675 453 5 1 1 453 2 453 0.0 802
aORI10010061 98.675 453 5 1 1 453 2 453 0.0 802
aORI10010267 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010115 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010112 98.649 74 1 0 380 453 1 74 2.02e-32 132