RefSeq NC_012623.1
DoriC accession number aORI10010070
OriC length 453 nt
OriC AT content 0.7307
The location of oriC region 385..837 nt
Browse in NCBI
OriC map
OriC sequences
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAGCTTAAATATGTGTCAATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAGCTTAAATATGTGTCAATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
TATTTTTAGAGTCTATACTGTTAAGATTCTAACAGTTTTGAAAAAGATTAATAAGTAACTTTTTTAGCTTAAATATGTGTCAATGGTAATCAGACGTATGTTTATAAAGTCTACCTTAGCCGTCTCTTTTTCAATATCGTATTTATTGTATATTATTGCTAAGATATCTTTCGGATCTGGTAAACTCGCCTTTATTATAGCATTGTTACAATTATATCCTTATTTCCTAATCGATTATTTGCCTACAGTACAAGTTGTTTCGTTGTTCTTCCAATCTCTTTTATTACTTCTTTTCGCTATTTTCATTTTATTGATTACTTACATGTTATTTTTATTCTACAAATTATACAAAATGGTAAAAACTTCAATTTTGAAGTAATATTGATATAACCTGTGGTCTAGATATTACCAATACAGTCATAGGAAACAGGTTTAACAGTAGAAACATTAGAA
ORB     AT-rich region
The information of repeat sequences

Motif GGTAAWCWSRCS

StartP-valueSite
1794.44e-08TTTCGGATCTGGTAAACTCGCCTTTATTATAG
851.13e-07ATGTGTCAATGGTAATCAGACGTATGTTTATA

Motif GSMWACAG

StartP-valueSite
2416.31e-06TCGATTATTTGCCTACAGTACAAGTTGT
4239.00e-06TACAGTCATAGGAAACAGGTTTAACAGT

Motif GYSGTC

StartP-valueSite
1193.81e-05GTCTACCTTAGCCGTCTCTTTTTCAA
3949.01e-05GATATAACCTGTGGTCTAGATATTAC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010070 100.0 453 0 0 1 453 1 453 0.0 837
aORI10010067 99.338 453 3 0 1 453 1 453 0.0 821
aORI10010073 99.117 453 4 0 1 453 1 453 0.0 815
aORI10010061 99.117 453 4 0 1 453 1 453 0.0 815
aORI10010088 99.117 453 3 1 2 453 1 453 0.0 813
aORI10010064 99.117 453 3 1 2 453 1 453 0.0 813
aORI10010076 99.117 453 1 2 4 453 1 453 0.0 811
aORI10010267 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010115 98.649 74 1 0 380 453 1 74 2.02e-32 132
aORI10010112 98.649 74 1 0 380 453 1 74 2.02e-32 132