RefSeq NC_012623.1
DoriC accession number aORI10010071
OriC length 387 nt
OriC AT content 0.6227
The location of oriC region 864584..864970 nt
Browse in NCBI
OriC map
OriC sequences
CTTTTCTATTGTTTGTGCTAACCCAGCTTTTAAAATATAAGCTATTTAACTGGGGAGTAAAAAACCCCTTTATTTCCACTGGAAAAATGTAAGTTGTGTCATATACAAGTCCTACCCCAGTATTTCATTTGGAGATTCTAGTGACATAAAATAAGCTTTGATTTCATTCTTATACAATTCTTTTGTATAATGGTTATCTAATTATAACAAAATGTTGCTCAAAATAATCTCCAATGGAACCGAAGGGGTGTCGCTGAAGATATGAACAGGTAAAATTTTTAATCTATCCTTGTCTTTATTTTTACTCAAGGGCCGGTAGCTCAGCCTGGAAGAGTGCTCGGTTTGCACCCGAGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACCTT
CTTTTCTATTGTTTGTGCTAACCCAGCTTTTAAAATATAAGCTATTTAACTGGGGAGTAAAAAACCCCTTTATTTCCACTGGAAAAATGTAAGTTGTGTCATATACAAGTCCTACCCCAGTATTTCATTTGGAGATTCTAGTGACATAAAATAAGCTTTGATTTCATTCTTATACAATTCTTTTGTATAATGGTTATCTAATTATAACAAAATGTTGCTCAAAATAATCTCCAATGGAACCGAAGGGGTGTCGCTGAAGATATGAACAGGTAAAATTTTTAATCTATCCTTGTCTTTATTTTTACTCAAGGGCCGGTAGCTCAGCCTGGAAGAGTGCTCGGTTTGCACCCGAGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACCTT
CTTTTCTATTGTTTGTGCTAACCCAGCTTTTAAAATATAAGCTATTTAACTGGGGAGTAAAAAACCCCTTTATTTCCACTGGAAAAATGTAAGTTGTGTCATATACAAGTCCTACCCCAGTATTTCATTTGGAGATTCTAGTGACATAAAATAAGCTTTGATTTCATTCTTATACAATTCTTTTGTATAATGGTTATCTAATTATAACAAAATGTTGCTCAAAATAATCTCCAATGGAACCGAAGGGGTGTCGCTGAAGATATGAACAGGTAAAATTTTTAATCTATCCTTGTCTTTATTTTTACTCAAGGGCCGGTAGCTCAGCCTGGAAGAGTGCTCGGTTTGCACCCGAGAGGTCCCGGGTTCAAATCCCGGCCGGTCCACCTT
ORB     AT-rich region
The information of repeat sequences

Motif CTYBATTTBHACYSRAGRGVTGBHRG

StartP-valueSite
3373.82e-13TGGAAGAGTGCTCGGTTTGCACCCGAGAGGTCCCGGGTTCAAATCC
2299.04e-12TCAAAATAATCTCCAATGGAACCGAAGGGGTGTCGCTGAAGATATG
2942.60e-10CTATCCTTGTCTTTATTTTTACTCAAGGGCCGGTAGCTCAGCCTGG
684.62e-10TAAAAAACCCCTTTATTTCCACTGGAAAAATGTAAGTTGTGTCATA

Motif GTSCTAMCCCAG

StartP-valueSite
1093.23e-08TCATATACAAGTCCTACCCCAGTATTTCATTT
155.54e-08TCTATTGTTTGTGCTAACCCAGCTTTTAAAAT

Motif CRGCCKG

StartP-valueSite
3738.37e-06GTTCAAATCCCGGCCGGTCCACCTT
3226.03e-05GCCGGTAGCTCAGCCTGGAAGAGTGCT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
aORI10010071 100.0 387 0 0 1 387 1 387 0.0 715
aORI10010114 99.483 387 1 1 1 387 386 1 0.0 702
aORI10010089 99.483 387 1 1 1 387 386 1 0.0 702
aORI10010074 99.483 387 1 1 1 387 386 1 0.0 702
aORI10010065 99.483 387 1 1 1 387 386 1 0.0 702
aORI10010117 99.225 387 2 1 1 387 386 1 0.0 697
aORI10010077 99.225 387 2 1 1 387 386 1 0.0 697
aORI10010068 99.225 387 2 1 1 387 386 1 0.0 697
aORI10010062 99.225 387 2 1 1 387 386 1 0.0 697
aORI10010269 98.966 387 3 1 1 387 386 1 0.0 691
aORI10010359 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010359 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010337 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010337 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010334 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010334 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010331 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010331 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010110 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010110 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010010 93.846 130 6 2 257 384 400 529 0.0 195
aORI10010010 78.035 173 23 12 43 203 43 212 2.25e-21 95
aORI10010013 95.122 82 3 1 307 387 111 192 2.22e-31 128
aORI10010384 96.053 76 3 0 310 385 373 298 2.87e-30 124
aORI10010264 96.0 75 3 0 310 384 327 401 1.03e-29 122
aORI10010368 95.946 74 3 0 310 383 124 197 3.71e-29 121
aORI10010343 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010342 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010341 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010340 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010339 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010043 94.667 75 4 0 310 384 103 29 4.81e-28 117
aORI10010100 94.595 74 4 0 310 383 712 639 1.73e-27 115
aORI10010099 93.243 74 5 0 310 383 501 574 8.04e-26 110
aORI10010356 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010353 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010350 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010347 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010344 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010196 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010193 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010103 92.0 75 6 0 310 384 266 340 1.04e-24 106
aORI10010024 91.139 79 6 1 310 387 328 406 1.04e-24 106
aORI10010363 96.226 53 2 0 310 362 472 524 3.77e-19 88
aORI10010357 91.304 46 3 1 307 351 46 1 2.28e-11 62
aORI10010354 91.304 46 3 1 307 351 46 1 2.28e-11 62
aORI10010351 91.304 46 3 1 307 351 46 1 2.28e-11 62
aORI10010348 91.304 46 3 1 307 351 46 1 2.28e-11 62
aORI10010345 91.304 46 3 1 307 351 46 1 2.28e-11 62