RefSeq GCF_000157355.2
Accession number NC_020995.1
DoriC accession number ORI97010228
OriC length 511 nt
OriC AT content 0.655577
The location of oriC region 3426866..100 nt
Browse in NCBI
OriC map
OriC sequences
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmhTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaa
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
rpmHTTATTTCCACCTCCATCAGGATAATGCTTATGCGCACAGACATACTTTGATAGTATAACGAGTCAAGTACTAGTTTGTCAATAAGAAGTTTGCTCAAAATCAGGCATTCTTTATCCACAATCCCTTTGATTTGTGTGGGTTTACTGTTTATAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTATTTTGGCTTTTTCCACAAACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGTGTTATCAAGGTGTGATCTTCACATCGATCTGTGGATAAAGGAGATTGTTTTACAGTTATGCACATTCTTTTTCTACCTGTGGATAGTCGGATTTCGAACATGTGCATTTCCATTTTTCTTTTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCTTTTTTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCTATTTTAGTTATATCTATTCTTAGTTATAGGAGGACAATTTdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif YTGTGGAWAASTWTTYC

StartP-valueSite
4455.57e-10TTATCGTAATCTGTGGAAAACTTTTTCAATCCGTGCT
2156.25e-09AACAAGCAGCCTGTAGAAAAGTTTTCCACAATCACTT
1611.21e-08TAGCCAATTTTTGTGGATAACTTTTTCCCCAGAGTTA
4055.65e-08TTATCCCGTTTTGTGGAAAAGTATTTTTTTCTAACCT
2485.92e-08ACTTTTTTAACTGTTGATAACTACCCCGAAACCTAGT

Motif MTGWGGAYAR

StartP-valueSite
4995.84e-06TCTTAGTTATAGGAGGACAATTT
3511.03e-05CTTTTTCTACCTGTGGATAGTCGGATTTCG
3031.19e-05TCACATCGATCTGTGGATAAAGGAGATTGT
301.86e-05GATAATGCTTATGCGCACAGACATACTTTG
152.28e-05TTCCACCTCCATCAGGATAATGCTTATGCG

Motif ACAATCAS

StartP-valueSite
2322.09e-05AAAGTTTTCCACAATCACTTTTTTAACT
2062.49e-05TTTTCCACAAACAAGCAGCCTGTAGAAA
1174.42e-05TTCTTTATCCACAATCCCTTTGATTTGT
966.42e-05AAGTTTGCTCAAAATCAGGCATTCTTTA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score