RefSeq GCF_000163055.2
Accession number NC_022124.1
DoriC accession number ORI97010503
OriC length 540 nt
OriC AT content 0.644444
The location of oriC region 709311..709850 nt
Browse in NCBI
OriC map
OriC sequences
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaa
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
-ACAAACTATCACAAGCAAAATAGTTATGGACAACTCTATAAAACAATATTGTTTACGAGTTGTCCTTTTTATTTCTAACCGCAATTAGGAACAATAACAACATTAAAACATTTGTGGATTATAAATAAAATACGTAATTTTGTATTCCCAAAAGCATCGTTATAGATGCAATTCAACCACCGATAGAAATCCAATAAAAATGAAACCATCCCCCAACACCTTATGGGAAGAATGTCTTAAGCAGATTCGTGTCCACTTGCCAGAGAAGCAATTCAGCACTTGGTTTAGCACAATTCAGCTACATTCGTATGTAGAAAAAGAGAATTGTGTTATTCTTCAAGTACCCAGCGAAATGGCTCGTGACTACATAGAAGAACATTATATGCGTCTTCTTGCGAATGCTTTGCGAGACAATTTTGGTTCTAGCGTAAAGCTAAAATATAGTATTTCGATGGCAAAGTTGCCTCATTCTGCCAACAATCAAGCAGGAGAGCAAAACGATAACGATGGACTTTATTCAGGAAACAATAGCTTTCCAAAdnaA
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif GYSTCHWYYTGCSA

StartP-valueSite
3856.03e-09AACATTATATGCGTCTTCTTGCGAATGCTTTGCG
2493.78e-08AAGCAGATTCGTGTCCACTTGCCAGAGAAGCAAT
4638.77e-08TGGCAAAGTTGCCTCATTCTGCCAACAATCAAGC

Motif CGATGG

StartP-valueSite
5058.71e-05AAAACGATAACGATGGACTTTATTCA
4508.71e-05TATAGTATTTCGATGGCAAAGTTGCC

Motif CAATTCARC

StartP-valueSite
2914.32e-06TGGTTTAGCACAATTCAGCTACATTCGTA
2694.32e-06GCCAGAGAAGCAATTCAGCACTTGGTTTA
1691.38e-05GTTATAGATGCAATTCAACCACCGATAGA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score