RefSeq GCF_000175575.2
Accession number NZ_CP005986.1
DoriC accession number ORI97016122
OriC length 250 nt
OriC AT content 0.536
The location of oriC region 1600..1849 nt
Browse in NCBI
OriC map
OriC sequences
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaaGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnan
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
dnaAGCGTGCTGTCGACAAAGCTGTGGATAAGCACCGGGACAAGACCGGTACGGTTTCGGTATAAAAATGGGCAGGGTGATCCATCCCAGGTCATACCGACTTATCCACAAGCTATACCCTTTGCGGCGCACCTAAAAAAGCAAATAAAAACCAGTGGGTTCATACCGCCCTCCACAGGCCAGACGGCCCCTTAATAAGATTATACAGAAAAAAGAAAATATTTATTAAATTTAGCGTTGCGGAGAGAGACGATdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif TTKCGG

StartP-valueSite
2341.22e-04AAATTTAGCGTTGCGGAGAGAGACGA
1181.22e-04GCTATACCCTTTGCGGCGCACCTAAA
512.29e-04ACCGGTACGGTTTCGGTATAAAAATG

Motif GKYCAKACSGMCYY

StartP-valueSite
1555.09e-09AAACCAGTGGGTTCATACCGCCCTCCACAGGCCA
864.94e-08ATCCATCCCAGGTCATACCGACTTATCCACAAGC
1741.97e-07GCCCTCCACAGGCCAGACGGCCCCTTAATAAGAT

Motif TTAWTAARWTT

StartP-valueSite
2193.11e-07AAGAAAATATTTATTAAATTTAGCGTTGCGG
1881.65e-06AGACGGCCCCTTAATAAGATTATACAGAAAA
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score