RefSeq | GCF_000219535.2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Accession number | NZ_CP007806.1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Lineage | bacteria, firmicutes, bacilli, bacillales, paenibacillaceae, brevibacillus. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
DoriC accession number | ORI97011146 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC length | 586 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC AT content | 0.667235 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The location of oriC region | 5113662..100 nt | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Browse in NCBI | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC map | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
OriC sequences |
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmhATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaa
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
rpmHATTGAAGTTACACCTCCGTCCTCCAAGCATTCTTTGGAATTATATAAAGAAATAATCAAAAAGTCAAGTTACTCGTTATCTAATCCCTTTTGCCAAATTAATCCCTCTACTTTTACCTTCTCTTCCTCCTACATCTATCTTTTTTCTTTTCATCGTCTGTTTTCTACTATAAATAACTATCCACAAAAGATTATTTCCCGCCCCTGTGTATATCTTTTTTATCCACAGAAAAGTTTTCTACAAATTTATAAACAGGTTGCACACAAAATATAGGGGTGTTGATGAAATACGGCTACTATTTGTTGTGTTTGTGGATAACTATTAAAAAACCATTGATATCATGGCTTTTATTTGATATCATGTTTTTGTTTTGATCCGTTGATAAGTGAAATCAGATTTTTACTTTTCCACAGCATGTGGATAAGGTTGTGGACAGATATTCTGCATTGTGAATAAGATACTCACAGCTATGCGGATAATTGTCTTATTTTTTTCTCAAAAGGTACGGGAGTCCGTGATGACATATGATTTAGCATTTTTAATTATCCACAATGCCTGTGTAGTGCTGAAAGGAGGGATTTACTAGdnaA
5'-DnaA box-3'
3'-DnaA box-5'
Spacer
DnaA-trio
ATP-DnaA box
AT-rich region GATC   CtrA binding motif Fis binding site IHF binding site |
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The information of repeat sequences |
Motif CAMAATRTVTGGGTRWTGNTGADRDVAGR
Motif TGTGRATAA
Motif CCGYCC
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Distribution of genes on leading or lagging strand | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Distribution of nucleotide on leading or lagging strand | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
The result of BLAST |
Download
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