RefSeq GCF_000230975.2
Accession number NC_021172.1
DoriC accession number ORI97227674
OriC length 310 nt
OriC AT content 0.364516
The location of oriC region 1631..1940 nt
Browse in NCBI
OriC map
OriC sequences
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaaTTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnan
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
dnaATTGAGCACTGATCGCGGCGTCCCCAAGCCGCGACCTGAACGGCGCGAGGCCGGTCCTTCCAAGCCCTCGGGAGGCCGGCCTTGCTGTTTTTGCCGGTGGGGCATGATTTGTAACGCGAAAATGCCGCCTAGCTTCTACATCTTTGCTTGAAATGTGAGCCCCATTCGGCTCTGATCCCCCTCCGTGAGCGATTCCGCTGCGAAGCCGCTTCTGGGGCGCCCGCGGGCCATTCCTTTGCGCGTGATCGTCACCGGCGGCGTGCCGATGCCGCCGTTCCACGCGCTCTCCGAAATCAGGACTGAGGACAGACdnaN
5'-DnaA box-3'      3'-DnaA box-5'     Spacer     DnaA-trio            ATP-DnaA box
AT-rich region     GATC   CtrA binding motif     Fis binding site     IHF binding site
The information of repeat sequences

Motif WTSAGBWSTGA

StartP-valueSite
15.44e-07.TTGAGCACTGATCGCGGCGTC
1473.12e-06ACATCTTTGCTTGAAATGTGAGCCCCATTCG
2928.73e-06GCTCTCCGAAATCAGGACTGAGGACAGAC
1031.67e-05CCGGTGGGGCATGATTTGTAACGCGAAAATG
1642.08e-05GTGAGCCCCATTCGGCTCTGATCCCCCTCCG

Motif AWGCCGC

StartP-valueSite
2651.09e-04CGGCGTGCCGATGCCGCCGTTCCACGC
1211.09e-04TAACGCGAAAATGCCGCCTAGCTTCTA
2021.87e-04TTCCGCTGCGAAGCCGCTTCTGGGGCG
251.87e-04CGGCGTCCCCAAGCCGCGACCTGAACG
1912.64e-04TCCGTGAGCGATTCCGCTGCGAAGCCG

Motif TYTTTG

StartP-valueSite
871.31e-04GGCCTTGCTGTTTTTGCCGGTGGGGC
1403.37e-04AGCTTCTACATCTTTGCTTGAAATGT
Distribution of genes on leading or lagging strand
Distribution of nucleotide on leading or lagging strand
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score