RefSeq NC_001380
DoriC accession number pORI00000351
OriC length 654 nt
OriC AT content 0.5688
The location of oriC region 1..654 nt
Browse in NCBI
OriC map
OriC sequences
CTGCAGAAGTAGTCGCTGATTGGCTAATTCAGCGTATCAAAGACAAAGGCGACCAAAAATAGCTTGAGTTCTTTTAGAACAAAAAAGAAAGACAGTAGTTGCACCTACTGTCTTTCTTTTGCGTTGTGCTTTTAGTTCCTCGAACTTTTAGCGTCAAGCATATTATATCATGGGGCGAGAAATTCTGTCAAAATAATGCTATAATGCTTTTGAGGCACCTCAGCGATACGGTCGGTGGTGTGAATCTCATTTACGTAGGGCGACTGGAAACGGATAGCTCAAAGGGCGCGTTTGAGTGTCGGGTGTGGGACTGCCTTCAGCTTCGGGCTGTAAAGACCCCTGATACTTTTGAATGAGATGACCCTTTGGGGTCTTTTTTGTTTTTTTAGGGAGATGTTGTGGGGGATTTTTTCTCCGAAAAAATCTAAAATATGGGGGGGCTACTACGACCCCCCCTATAGTGCCGAGTGCCAAAATCAAAAAAAAAACGCCTTTAGCCTTAGAGCTGCAAGGGTTTGAGGCTCGTCAAATCTCGGCGACTTTTCGGCGACTTTTCGGCGACTTTTTAGAGATTTTTTGGGAAAAATACGAAAAAGATTGCATTGAGTGCACGGTTATGCTACTATAGTTTTATAAAATTTTGAGAGGTGACGC
CTGCAGAAGTAGTCGCTGATTGGCTAATTCAGCGTATCAAAGACAAAGGCGACCAAAAATAGCTTGAGTTCTTTTAGAACAAAAAAGAAAGACAGTAGTTGCACCTACTGTCTTTCTTTTGCGTTGTGCTTTTAGTTCCTCGAACTTTTAGCGTCAAGCATATTATATCATGGGGCGAGAAATTCTGTCAAAATAATGCTATAATGCTTTTGAGGCACCTCAGCGATACGGTCGGTGGTGTGAATCTCATTTACGTAGGGCGACTGGAAACGGATAGCTCAAAGGGCGCGTTTGAGTGTCGGGTGTGGGACTGCCTTCAGCTTCGGGCTGTAAAGACCCCTGATACTTTTGAATGAGATGACCCTTTGGGGTCTTTTTTGTTTTTTTAGGGAGATGTTGTGGGGGATTTTTTCTCCGAAAAAATCTAAAATATGGGGGGGCTACTACGACCCCCCCTATAGTGCCGAGTGCCAAAATCAAAAAAAAAACGCCTTTAGCCTTAGAGCTGCAAGGGTTTGAGGCTCGTCAAATCTCGGCGACTTTTCGGCGACTTTTCGGCGACTTTTTAGAGATTTTTTGGGAAAAATACGAAAAAGATTGCATTGAGTGCACGGTTATGCTACTATAGTTTTATAAAATTTTGAGAGGTGACGC
AT-rich region
The information of repeat sequences

Motif SGGCGACT

StartP-valueSite
5567.54e-06GGCGACTTTTCGGCGACTTTTTAGAGAT
5457.54e-06GGCGACTTTTCGGCGACTTTTCGGCGAC
5347.54e-06CGTCAAATCTCGGCGACTTTTCGGCGAC
2581.80e-05CATTTACGTAGGGCGACTGGAAACGGAT
4383.96e-05AAATATGGGGGGGCTACTACGACCCCCC

Motif GAVAAADTCDAAMAAAA

StartP-valueSite
4701.40e-08AGTGCCGAGTGCCAAAATCAAAAAAAAAACGCCTTTA
423.66e-08GCGTATCAAAGACAAAGGCGACCAAAAATAGCTTGAG
5816.44e-08GATTTTTTGGGAAAAATACGAAAAAGATTGCATTGAG
4171.50e-07TTTTTTCTCCGAAAAAATCTAAAATATGGGGGGGCTA
1772.13e-07ATCATGGGGCGAGAAATTCTGTCAAAATAATGCTATA

Motif CYTWTAGYKBCDAG

StartP-valueSite
1459.54e-08GTTCCTCGAACTTTTAGCGTCAAGCATATTATAT
4553.83e-07TACGACCCCCCCTATAGTGCCGAGTGCCAAAATC
3141.01e-06TGTGGGACTGCCTTCAGCTTCGGGCTGTAAAGAC
4991.12e-06CGCCTTTAGCCTTAGAGCTGCAAGGGTTTGAGGC
1291.78e-06TTGCGTTGTGCTTTTAGTTCCTCGAACTTTTAGC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000351 100.0 654 0 0 1 654 1 654 0.0 1208
pORI00000420 99.694 654 2 0 1 654 1 654 0.0 1197