RefSeq NC_001911
DoriC accession number pORI00000357
OriC length 348 nt
OriC AT content 0.8506
The location of oriC region 1..348 nt
Browse in NCBI
OriC map
OriC sequences
TTTTTTTGTTTTAAAAAAAAATAGCGAAAGCCTTAATTTTCATCAAGGCTTTCGCTATTTTTTATTATATGTTTATTTATCTTTTTATATAAGATTAAAACACTGTTATTTTGCATTTATATTATAGAAAGCATATATCAAAAAAAACAACATGCATTTAAAAGTTTAATTCAAAAAAAAACTTTAAAAAAAAATTTTTTTTTAAAGTTTTTTTTTTGAATTAAACTAAATAATATAATTAATGATAAATTTTTTAAAAAAAAATTGAAATAAGTAAATTTTAGAAAAAGAAAATCGTACGCAAAAAAAAACGTATTATTTTAGAAAAACATTTTATGTTTAATTTTT
TTTTTTTGTTTTAAAAAAAAATAGCGAAAGCCTTAATTTTCATCAAGGCTTTCGCTATTTTTTATTATATGTTTATTTATCTTTTTATATAAGATTAAAACACTGTTATTTTGCATTTATATTATAGAAAGCATATATCAAAAAAAACAACATGCATTTAAAAGTTTAATTCAAAAAAAAACTTTAAAAAAAAATTTTTTTTTAAAGTTTTTTTTTTGAATTAAACTAAATAATATAATTAATGATAAATTTTTTAAAAAAAAATTGAAATAAGTAAATTTTAGAAAAAGAAAATCGTACGCAAAAAAAAACGTATTATTTTAGAAAAACATTTTATGTTTAATTTTT
AT-rich region
The information of repeat sequences

Motif KCGWAMGC

StartP-valueSite
2953.32e-07AAAAAGAAAATCGTACGCAAAAAAAAAC
249.78e-07AAAAAAAATAGCGAAAGCCTTAATTTTC
485.06e-06TTTCATCAAGGCTTTCGCTATTTTTTAT
1255.33e-05ATTTATATTATAGAAAGCATATATCAAA

Motif YWTGCA

StartP-valueSite
1516.59e-05AAAAAAACAACATGCATTTAAAAGTT
1102.42e-04ACACTGTTATTTTGCATTTATATTAT

Motif CAYTKT

StartP-valueSite
1013.18e-05AAGATTAAAACACTGTTATTTTGCAT
3301.28e-03TTTAGAAAAACATTTTATGTTTAATT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000357 100.0 348 0 0 1 348 1 348 0.0 643
pORI00000551 99.143 350 1 2 1 348 1 350 0.0 628
pORI00000550 99.143 350 1 2 1 348 1 350 0.0 628