RefSeq NC_002075
DoriC accession number pORI00000166
OriC length 209 nt
OriC AT content 0.5311
The location of oriC region 6819..7027 nt
Browse in NCBI
OriC map
OriC sequences
AGTGGTCACTATTGAAGTGCCCAGTTATACGCACCAAATAAATTGGGGCGTTACTGGCGGAATGTACCTGCAGGGGCTTATAATATTCATAGTTGTTGTTAGAACCTGAACCCTTTTACCGTTTTTGGCGGTGAGGGTTCTTTTTTTTAGGCAGTGATGCGAGTTGGGGGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAG
AGTGGTCACTATTGAAGTGCCCAGTTATACGCACCAAATAAATTGGGGCGTTACTGGCGGAATGTACCTGCAGGGGCTTATAATATTCATAGTTGTTGTTAGAACCTGAACCCTTTTACCGTTTTTGGCGGTGAGGGTTCTTTTTTTTAGGCAGTGATGCGAGTTGGGGGTGAGTCAACGGTAACCGGACCGTAGGGAGGATTAAGGAG
AT-rich region
The information of repeat sequences

Motif MYGNACC

StartP-valueSite
293.29e-05GCCCAGTTATACGCACCAAATAAATTG
1859.68e-05TCAACGGTAACCGGACCGTAGGGAGGA
1061.63e-04TTGTTAGAACCTGAACCCTTTTACCGT
623.13e-04TACTGGCGGAATGTACCTGCAGGGGCT

Motif TWGGSRGTGA

StartP-valueSite
1252.64e-06TTTACCGTTTTTGGCGGTGAGGGTTCTTTT
1488.38e-06TTCTTTTTTTTAGGCAGTGATGCGAGTTGG
1641.33e-05GTGATGCGAGTTGGGGGTGAGTCAACGGTA

Motif CTTWTA

StartP-valueSite
772.35e-04CCTGCAGGGGCTTATAATATTCATAG
1135.31e-04AACCTGAACCCTTTTACCGTTTTTGG
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000166 100.0 209 0 0 1 209 1 209 0.0 387
pORI00000164 95.302 149 5 2 62 209 286 433 0.0 235
pORI00000156 92.308 65 2 3 16 79 197 259 1.86e-19 90
pORI00000156 97.674 43 1 0 167 209 470 512 5.2e-15 75
pORI00000168 100.0 40 0 0 170 209 1008 969 5.2e-15 75
pORI00000165 97.674 43 1 0 167 209 189 231 5.2e-15 75