RefSeq NC_002120
DoriC accession number pORI00000041
OriC length 1020 nt
OriC AT content 0.5176
The location of oriC region 69542..888 nt
Browse in NCBI
OriC map
OriC sequences
CGTCGTATTTACTGAAAATCCGGTTAGCGCCGGAGGGTTTCGCTCGTCTGCCTCCTGTCAGTGCTTGTTATTTGAGCGATGTGACGGCCGCTACACGACCTATCTTCTCTTTCCCGCCCTGAAAATGTCCTCGAATTCTCCCAATACTGTCGCTTGAATGTACTGATTTAGGTTATCCACAGTTAACTGCAAGGGAATTTCCCATAAAGTTACAACCGATATATTTTTTAAGCGCCAGCCGAAGTTGTTTTAAAGTGCGTGGTTTCTTTTAAACCACTGCTCAGTACTTCTTTTAAATACCTTTTCTTTTATTCCTATAAATAAATAACCTATTCATAGTCTGCCCTTTGGACAGACTATGATAATGCCCGCCCTTGCAGCGAACTCACGTTCGCGCCGGTTCGAAAACAGAAAAAGCACCACCCACCACAATCCGACGGGCGCATAAATTCTTATTAGTTACAACATTCATCATTCGACTAAAAAGATGCCAGACCGCACACATCTGAGACCACTGCACGCTTGCCCACTAAAAAGCCGCCCCGCCCCGGGCCAACGGCCCGGAACAGAGTGGCTTTACAATGAGTGTTGTAACTAAAATTTTCGAGTCGCTGCAAGTCACGTCGCTGCAAGTCATTCGAACACGCTCGTAAGCGGCCCTAATGGCCGCTAACGCGGAGATACGCCCCGCTGCGGCAAAGCCTTGTCGGGACCACTCCGACCGCGTAATGAAACACCTACGCTACTTTTAGTAGGTTTAGCTTTGCAGGGAGGAATTTGGGATTGGTGAAACCTATCAAACCGGAACCGGCTACGCCGGGCTATCGGCGCCAATTGTCAACAGAGTTATAGTTAATATCCGCTGGCGCCTTCATGCCGCGATGCGGCATTGAAAAGACCGGCTGCGCACTGCTCGCCTGTCCGGTAAGGACATGATATAAACGTTTGTGTTTAGGGGTTTGGGGAGCAACGGAACCCAAAAACCAGTTAACTAGCCAATTAACTTAAAATGAAAAACCG
CGTCGTATTTACTGAAAATCCGGTTAGCGCCGGAGGGTTTCGCTCGTCTGCCTCCTGTCAGTGCTTGTTATTTGAGCGATGTGACGGCCGCTACACGACCTATCTTCTCTTTCCCGCCCTGAAAATGTCCTCGAATTCTCCCAATACTGTCGCTTGAATGTACTGATTTAGGTTATCCACAGTTAACTGCAAGGGAATTTCCCATAAAGTTACAACCGATATATTTTTTAAGCGCCAGCCGAAGTTGTTTTAAAGTGCGTGGTTTCTTTTAAACCACTGCTCAGTACTTCTTTTAAATACCTTTTCTTTTATTCCTATAAATAAATAACCTATTCATAGTCTGCCCTTTGGACAGACTATGATAATGCCCGCCCTTGCAGCGAACTCACGTTCGCGCCGGTTCGAAAACAGAAAAAGCACCACCCACCACAATCCGACGGGCGCATAAATTCTTATTAGTTACAACATTCATCATTCGACTAAAAAGATGCCAGACCGCACACATCTGAGACCACTGCACGCTTGCCCACTAAAAAGCCGCCCCGCCCCGGGCCAACGGCCCGGAACAGAGTGGCTTTACAATGAGTGTTGTAACTAAAATTTTCGAGTCGCTGCAAGTCACGTCGCTGCAAGTCATTCGAACACGCTCGTAAGCGGCCCTAATGGCCGCTAACGCGGAGATACGCCCCGCTGCGGCAAAGCCTTGTCGGGACCACTCCGACCGCGTAATGAAACACCTACGCTACTTTTAGTAGGTTTAGCTTTGCAGGGAGGAATTTGGGATTGGTGAAACCTATCAAACCGGAACCGGCTACGCCGGGCTATCGGCGCCAATTGTCAACAGAGTTATAGTTAATATCCGCTGGCGCCTTCATGCCGCGATGCGGCATTGAAAAGACCGGCTGCGCACTGCTCGCCTGTCCGGTAAGGACATGATATAAACGTTTGTGTTTAGGGGTTTGGGGAGCAACGGAACCCAAAAACCAGTTAACTAGCCAATTAACTTAAAATGAAAAACCG
AT-rich region
The information of repeat sequences

Motif TTGHRKKKASKRRTTTRGG

StartP-valueSite
9462.78e-10ATATAAACGTTTGTGTTTAGGGGTTTGGGGAGCAACGGA
7643.91e-10AGGTTTAGCTTTGCAGGGAGGAATTTGGGATTGGTGAAA
1548.00e-10ATACTGTCGCTTGAATGTACTGATTTAGGTTATCCACAG

Motif TTCTTTTA

StartP-valueSite
3041.92e-05TAAATACCTTTTCTTTTATTCCTATAAA
2881.92e-05TGCTCAGTACTTCTTTTAAATACCTTTT
2641.92e-05AGTGCGTGGTTTCTTTTAAACCACTGCT
2453.49e-05CCAGCCGAAGTTGTTTTAAAGTGCGTGG

Motif GTCGCTGCAAGTCA

StartP-valueSite
6233.36e-09TGCAAGTCACGTCGCTGCAAGTCATTCGAACACG
6083.36e-09AAATTTTCGAGTCGCTGCAAGTCACGTCGCTGCA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000041 100.0 1020 0 0 1 1020 1 1020 0.0 1884
pORI00000341 94.404 965 42 5 1 954 2162 1199 0.0 1472
pORI00000214 94.196 827 41 4 1 821 1 826 0.0 1254