RefSeq NC_002148
DoriC accession number pORI00000179
OriC length 1333 nt
OriC AT content 0.6879
The location of oriC region 1233..578 nt
Browse in NCBI
OriC map
OriC sequences
ATACATTCAATTTACATTCACGCCACAAGATGACAAAAAAGAATGGCTAGAAGGCAAAACAAAAAAAACCAAAAGCAAATGAGGCGGTTTACGGGCAGTTTGAAAACGTTTATCTTTCTGAATCAGAAATAAACACGATAGTTTATGACTGGCAGATGAAGTATCTGATTGAAGAACTTTCAGAATGGAAGCACAAAGACTAATCCTAAGACCAGCAAGTCCGATTTGTAGCTGCTAAAAGACTTTAAAGCCAAAAAACAAAAGGATCAGGCACAAAACATTTTAGATTTATACAAGTAATACGGGTTAAGGTCCTATTTTTTTTCATTTCTAAGTCCGTATTTTAACCCGGTTTTAAATTCGAGTTTTAAAAGGTAAATCATCAGTATAAACCCCTTAAACCATTCCTACACCTAAAATACACACCCACTCTTACAACTCCTATTTTTTTTCTTCTTTTTCTCTTTTCTTTTAAAATCAATCACCCTAAACCACTCTTTTTTTTATCAATTATCATTCCAGCAATTCATTAAATATTCTAATCCAATAAACACAAAGCCACCCACCACAGCCGTTCATATCAAATACCAAAGGTATATGTATGATGTGTGTATGTAATCACTCGGTGAAATCGAGTGACTACATACACTAAAAGGCTGTGGTGGGTGGCGAATTCATACTTTCAAATAAAAAAAACCGTGGAAAACAGAGTTTACTACTTATTAACTACTTTTTATACTTTTTCAGTTGATTTTTCTAGAGTTAAATATACCTATTTCAGTTTAAAATGACCTCAAATCATATAAGAAATTAGTCTTTAAAAATTGTCCGAACAGAGTTTACTACTTATTTGACTATTTATTTTACCTTTTTGTTTGATTTTTAATCTTTTACCTTTCTTAAACCGCCCGTTTTGGTTTTGCTTTTAAGGAATATTTTATAGAGTCCTGGATTTTCGTATTCATAGCGATCTGAATTCCAGTTTTTTTCTTATAAAATAATTATTTTATTAAAAGTTTTAATTGTTTTTAAAGTTTTTTTAATAAAAAAAATTACCTTTTAAATCAGTTTTTTTTTTCTTTATATTCTTTATATACTCTTTAAATACGATTCAGCAAACTCTTTACGGGTTCAAAAACCCGCATAAACACGGGCTGAAATGACATGAGAAAGGGACATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTGGCCTGAAATGACATAGACAAGGGTCAAATTGACTTTTGTCCTTACCCATGTATAATTTGCTTAAAAGGAGGTGTCGAT
ATACATTCAATTTACATTCACGCCACAAGATGACAAAAAAGAATGGCTAGAAGGCAAAACAAAAAAAACCAAAAGCAAATGAGGCGGTTTACGGGCAGTTTGAAAACGTTTATCTTTCTGAATCAGAAATAAACACGATAGTTTATGACTGGCAGATGAAGTATCTGATTGAAGAACTTTCAGAATGGAAGCACAAAGACTAATCCTAAGACCAGCAAGTCCGATTTGTAGCTGCTAAAAGACTTTAAAGCCAAAAAACAAAAGGATCAGGCACAAAACATTTTAGATTTATACAAGTAATACGGGTTAAGGTCCTATTTTTTTTCATTTCTAAGTCCGTATTTTAACCCGGTTTTAAATTCGAGTTTTAAAAGGTAAATCATCAGTATAAACCCCTTAAACCATTCCTACACCTAAAATACACACCCACTCTTACAACTCCTATTTTTTTTCTTCTTTTTCTCTTTTCTTTTAAAATCAATCACCCTAAACCACTCTTTTTTTTATCAATTATCATTCCAGCAATTCATTAAATATTCTAATCCAATAAACACAAAGCCACCCACCACAGCCGTTCATATCAAATACCAAAGGTATATGTATGATGTGTGTATGTAATCACTCGGTGAAATCGAGTGACTACATACACTAAAAGGCTGTGGTGGGTGGCGAATTCATACTTTCAAATAAAAAAAACCGTGGAAAACAGAGTTTACTACTTATTAACTACTTTTTATACTTTTTCAGTTGATTTTTCTAGAGTTAAATATACCTATTTCAGTTTAAAATGACCTCAAATCATATAAGAAATTAGTCTTTAAAAATTGTCCGAACAGAGTTTACTACTTATTTGACTATTTATTTTACCTTTTTGTTTGATTTTTAATCTTTTACCTTTCTTAAACCGCCCGTTTTGGTTTTGCTTTTAAGGAATATTTTATAGAGTCCTGGATTTTCGTATTCATAGCGATCTGAATTCCAGTTTTTTTCTTATAAAATAATTATTTTATTAAAAGTTTTAATTGTTTTTAAAGTTTTTTTAATAAAAAAAATTACCTTTTAAATCAGTTTTTTTTTTCTTTATATTCTTTATATACTCTTTAAATACGATTCAGCAAACTCTTTACGGGTTCAAAAACCCGCATAAACACGGGCTGAAATGACATGAGAAAGGGACATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGTCATTTAGTCTGTGGCCTGAAATGACATAGACAAGGGTCAAATTGACTTTTGTCCTTACCCATGTATAATTTGCTTAAAAGGAGGTGTCGAT
AT-rich region
The information of repeat sequences

Motif AGAAGGAGTCATTTAGTCTGT

StartP-valueSite
12342.40e-13TTAGTCTGTTAGAAGGAGTCATTTAGTCTGTGGCCTGAAAT
12122.40e-13TTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGT
11902.40e-13TTAGTCTGTTAGAAGGAGTCATTTAGTCTGTTAGAAGGAGT
11682.25e-12AAATGACATGAGAAAGGGACATTTAGTCTGTTAGAAGGAGT

Motif ACGGGY

StartP-valueSite
11502.87e-05CCGCATAAACACGGGCTGAAATGACA
912.87e-05GAGGCGGTTTACGGGCAGTTTGAAAA
11268.83e-05CAAACTCTTTACGGGTTCAAAAACCC
3028.83e-05TACAAGTAATACGGGTTAAGGTCCTA
1481.58e-04ATAGTTTATGACTGGCAGATGAAGTA

Motif RGCCWRAAADCAMAAAGACAAVNMCCAAA

StartP-valueSite
12552.36e-12TTTAGTCTGTGGCCTGAAATGACATAGACAAGGGTCAAATTGACTTTTG
2496.02e-12AAGACTTTAAAGCCAAAAAACAAAAGGATCAGGCACAAAACATTTTAGA
5421.19e-10AAATATTCTAATCCAATAAACACAAAGCCACCCACCACAGCCGTTCATA
451.60e-10AAAAAAGAATGGCTAGAAGGCAAAACAAAAAAAACCAAAAGCAAATGAG
1822.30e-10AAGAACTTTCAGAATGGAAGCACAAAGACTAATCCTAAGACCAGCAAGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000179 100.0 1333 0 0 1 1333 1 1333 0.0 2462
pORI00000179 95.122 41 1 1 1214 1254 1171 1210 7.76e-11 64
pORI00000179 95.122 41 1 1 1171 1210 1214 1254 7.76e-11 64