RefSeq NC_002610
DoriC accession number pORI00000056
OriC length 733 nt
OriC AT content 0.457
The location of oriC region 4448..5180 nt
Browse in NCBI
OriC map
OriC sequences
AGGATCTTCTTGAGATCCCATTTGGATCGTCGTAATCTCTTGCTCTGTAAACGAAAAAACCGCCTTGGCGGGCGGTTTTTTCGAAGGTTCGAGGAGTTGGCGCTCTTTGAACCGAGGTAACTGGCTTGGAGGAGCGCAGTAACCAAATTCGTTCTTTCAGTTTAGCCTTAACTGGCACATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTTGCATGCCTTTCCGGGTTGGACTCAAGATGACAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAATGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGGTTCGCCACCACTGATTTGAGCGTCAAATTCTGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCCGCTGGGCGGCCTCCTCTTTTCCGCCTCCCTTGCTCGCTCGGTTTTCTCGAGCTTTTATAAGAACGGTCTTGCCGCTCGCCGCAGCCGAACGACCGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAAAAGAGACTGGTTTGACACTGAGCACTGACGCTCTGAGGCCTCTT
AGGATCTTCTTGAGATCCCATTTGGATCGTCGTAATCTCTTGCTCTGTAAACGAAAAAACCGCCTTGGCGGGCGGTTTTTTCGAAGGTTCGAGGAGTTGGCGCTCTTTGAACCGAGGTAACTGGCTTGGAGGAGCGCAGTAACCAAATTCGTTCTTTCAGTTTAGCCTTAACTGGCACATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTTGCATGCCTTTCCGGGTTGGACTCAAGATGACAGTTACCGGATAAGGCGCAGCAGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGACAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAATGGCAGGAACAGGAGAGCGCACGAGGGAGCCATCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGGTTCGCCACCACTGATTTGAGCGTCAAATTCTGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCCGCTGGGCGGCCTCCTCTTTTCCGCCTCCCTTGCTCGCTCGGTTTTCTCGAGCTTTTATAAGAACGGTCTTGCCGCTCGCCGCAGCCGAACGACCGGAGCGTAGCGACTGAGTGAGCGAGGAAGCGGAAAAGAGACTGGTTTGACACTGAGCACTGACGCTCTGAGGCCTCTT
AT-rich region
The information of repeat sequences

Motif AACBGNCTTGSMGG

StartP-valueSite
583.65e-08TAAACGAAAAAACCGCCTTGGCGGGCGGTTTTTT
1192.79e-07GAACCGAGGTAACTGGCTTGGAGGAGCGCAGTAA
3376.91e-07GCTTGGAGCGAACTGCCTACCCGGAACTGAGTGT
6231.13e-06CTTTTATAAGAACGGTCTTGCCGCTCGCCGCAGC
4112.20e-06GACACCGGTAAACCGAATGGCAGGAACAGGAGAG

Motif GGAATGASAC

StartP-valueSite
3969.29e-07CCATAACAGCGGAATGACACCGGTAAACCG
3682.03e-06TGTCAGGCGTGGAATGAGACAAACGCGGCC
6871.45e-05CGAGGAAGCGGAAAAGAGACTGGTTTGACA
6981.73e-05AAAAGAGACTGGTTTGACACTGAGCACTGA

Motif CAGTWACC

StartP-valueSite
2691.22e-05CTCAAGATGACAGTTACCGGATAAGGCG
2061.22e-05TCCTCTAAATCAGTTACCAGTGGCTGCT
1372.41e-05TGGAGGAGCGCAGTAACCAAATTCGTTC
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000056 100.0 733 0 0 1 733 1 733 0.0 1354
pORI00000043 90.831 698 49 12 45 733 182 873 0.0 920
pORI00000244 92.857 560 35 5 3 560 243 799 0.0 808
pORI00000061 91.203 557 45 4 6 560 168 722 0.0 754
pORI00000307 89.483 561 56 3 1 560 300 858 0.0 706
pORI00000116 89.483 561 56 3 1 560 300 858 0.0 706
pORI00000110 90.52 538 45 6 27 560 2196 2731 0.0 706
pORI00000098 89.483 561 56 3 1 560 300 858 0.0 706
pORI00000095 89.483 561 56 3 1 560 300 858 0.0 706
pORI00000086 91.564 486 30 11 105 586 851 373 0.0 660
pORI00000094 85.665 579 57 21 1 560 1817 1246 0.0 586
pORI00000093 85.665 579 57 21 1 560 901 330 0.0 586
pORI00000198 85.615 577 55 23 2 558 96 664 0.0 580
pORI00000060 84.602 578 64 18 1 560 2327 1757 0.0 551
pORI00000238 84.429 578 64 19 1 560 261 830 0.0 545
pORI00000111 83.866 595 63 27 1 573 50 633 0.0 536
pORI00000069 85.537 484 46 17 216 686 3336 3808 0.0 484
pORI00000315 82.31 554 76 19 38 573 804 1353 0.0 460
pORI00000314 81.467 518 73 18 3 502 27 539 0.0 403
pORI00000075 81.467 518 73 18 3 502 27 539 0.0 403
pORI00000320 83.288 371 43 13 206 558 336 705 0.0 324
pORI00000312 83.288 371 43 13 206 558 336 705 0.0 324
pORI00000306 82.124 386 52 14 208 576 910 525 0.0 315
pORI00000012 77.25 589 97 23 3 558 70 654 0.0 311
pORI00000022 77.083 624 85 43 1 573 10 626 0.0 307
pORI00000301 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000294 81.771 384 51 15 208 573 915 533 0.0 303
pORI00000292 81.771 384 51 15 208 573 915 533 0.0 303
pORI00000290 81.771 384 51 15 208 573 906 524 0.0 303
pORI00000239 81.771 384 51 15 208 573 729 347 0.0 303
pORI00000224 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000223 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000222 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000097 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000092 82.385 369 46 15 208 558 396 763 0.0 303
pORI00000112 81.989 372 46 15 206 558 1194 1563 0.0 298
pORI00000309 81.793 368 45 19 210 558 271 635 0.0 289
pORI00000308 81.522 368 46 19 210 558 271 635 0.0 283
pORI00000284 85.864 191 15 5 380 559 392 203 0.0 193
pORI00000234 85.864 191 15 5 380 559 392 203 0.0 193
pORI00000210 85.864 191 15 5 380 559 392 203 0.0 193
pORI00000209 85.864 191 15 5 380 559 392 203 0.0 193
pORI00000008 77.165 381 51 22 1 349 1641 1265 0.0 189
pORI00001192 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00001084 96.491 57 2 0 633 689 678 622 1.49e-20 95
pORI00001059 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00001058 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00000999 96.491 57 2 0 633 689 459 515 1.49e-20 95
pORI00000998 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00000968 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00000723 96.491 57 2 0 633 689 796 740 1.49e-20 95
pORI00000722 96.491 57 2 0 633 689 796 740 1.49e-20 95
pORI00000604 96.491 57 2 0 633 689 256 312 1.49e-20 95
pORI00000578 96.491 57 2 0 633 689 459 515 1.49e-20 95
pORI00000548 96.491 57 2 0 633 689 790 734 1.49e-20 95
pORI00000240 100.0 29 0 0 530 558 1015 1043 2.53e-08 55