RefSeq NC_002748
DoriC accession number pORI00000208
OriC length 1483 nt
OriC AT content 0.6682
The location of oriC region 592..2074 nt
Browse in NCBI
OriC map
OriC sequences
TGAATGTTTAGAACTTAGTAGTCGTCCAAAAACGACTACTTTTTTTGTTGAATCGTCCTTGGACGATTCGATGCTTTTGACTTGTAAGAACAGGATTGAATGAAGCCATACTGTTCGCATATTTTTAGTGGATGAACAAACAAAATACGAGAGATTTTTTGTTCGTTCATCCATGGTTTTAGGAAAAAGAGGGACGATTTCGGAAGAAGAAARCTCGTCTCTTTTTTTCTTCTTTTTGTATGACAAAAAGAAAGATCTTTTGCCCATTTTATTTTTATAAAATGGGTAGGTGGCGTTTGCGTAAAGCAAATCGACACAATCCAAAGGGGATAAAAGGGGAAAGTGAAACTTCCCCCTTTTCAAGCAACATTGTAATACAAGAACGAAGTGATTTGTATTACAATGTGATAGCTTGCAGTATTTATGGTTTTATATGGTCTATTTTGTTATAATGATTGTAACCGAATAGGGCGCAATACTTATAACAAAATCAATGACAAAGGGCGATTGAGAAATGAGCGCTGGGGCATTTTATATTTGAGTAAGTTATTGATGGATCAGAAAAATGTATCACAAATTTAAACAAAGACTCACTCATTTAAGAGACGCTACTAGCATGAAATTTTGTTGTTGCGATAAGCAACTTCTGATACAGGTTTTTAGGGGTTAGCACGACATCAATTTATTTGATGTGTAAGTGCGCATTGCACTCTTTTTTTACGAAACAAGCCGACCAGCGTTTGAAACTTTTTAGTTTTTCATCATTCTATTTTAAAACGTTCTAAAACTCGATTTAAGCGACTTTAATTCGAAACTGTCTATTTGTTCAAAGGAAGCATTAAGAATGCTTAAACGAGCTTTTAAGTGGGTTTAAATTGATTTTGAATTGAATAGCTTGTTGTAAGTTGTAAAAAAACAAGTTAAACAAAGTATCAGTTTTCCATTTAAGGGTTGTTAGGGCTTGCCCTGACCGTCTGTAAGACGCTTGATTGCATGATATGAGTATTTAGCTAGTCAAACAGTTAAAACAGCTTATATGAGAAATTAGAGGGAATCCAATAAATTCCTAAAAGCGGTTTTGATCTTTTCTTTTAGCGAGTGAACGAAGTGAACGCTGCAAGTAAAATGTGAGCGTGGTTTTCGCTCACTCCTTTTTTTGATGACTTTGACCTTTGGTTTTAAATTTTTGAAAAAAATAAAAAATAGGCGAAGCCTATATCTATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGAAAAAAATGTCAGTGGTAGTAAGGCTATAAAGATTTTTAAGGACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATAAGGACAGAAAAAGTTGAATTACTGTCCTTATTTTGATATAATAAAAGCATAGAGAAATTTACTCGCTAAAGTCTTTCTCTATGCCTACTTAAAATCACTCACAAAGGAGTAACTCTCT
TGAATGTTTAGAACTTAGTAGTCGTCCAAAAACGACTACTTTTTTTGTTGAATCGTCCTTGGACGATTCGATGCTTTTGACTTGTAAGAACAGGATTGAATGAAGCCATACTGTTCGCATATTTTTAGTGGATGAACAAACAAAATACGAGAGATTTTTTGTTCGTTCATCCATGGTTTTAGGAAAAAGAGGGACGATTTCGGAAGAAGAAARCTCGTCTCTTTTTTTCTTCTTTTTGTATGACAAAAAGAAAGATCTTTTGCCCATTTTATTTTTATAAAATGGGTAGGTGGCGTTTGCGTAAAGCAAATCGACACAATCCAAAGGGGATAAAAGGGGAAAGTGAAACTTCCCCCTTTTCAAGCAACATTGTAATACAAGAACGAAGTGATTTGTATTACAATGTGATAGCTTGCAGTATTTATGGTTTTATATGGTCTATTTTGTTATAATGATTGTAACCGAATAGGGCGCAATACTTATAACAAAATCAATGACAAAGGGCGATTGAGAAATGAGCGCTGGGGCATTTTATATTTGAGTAAGTTATTGATGGATCAGAAAAATGTATCACAAATTTAAACAAAGACTCACTCATTTAAGAGACGCTACTAGCATGAAATTTTGTTGTTGCGATAAGCAACTTCTGATACAGGTTTTTAGGGGTTAGCACGACATCAATTTATTTGATGTGTAAGTGCGCATTGCACTCTTTTTTTACGAAACAAGCCGACCAGCGTTTGAAACTTTTTAGTTTTTCATCATTCTATTTTAAAACGTTCTAAAACTCGATTTAAGCGACTTTAATTCGAAACTGTCTATTTGTTCAAAGGAAGCATTAAGAATGCTTAAACGAGCTTTTAAGTGGGTTTAAATTGATTTTGAATTGAATAGCTTGTTGTAAGTTGTAAAAAAACAAGTTAAACAAAGTATCAGTTTTCCATTTAAGGGTTGTTAGGGCTTGCCCTGACCGTCTGTAAGACGCTTGATTGCATGATATGAGTATTTAGCTAGTCAAACAGTTAAAACAGCTTATATGAGAAATTAGAGGGAATCCAATAAATTCCTAAAAGCGGTTTTGATCTTTTCTTTTAGCGAGTGAACGAAGTGAACGCTGCAAGTAAAATGTGAGCGTGGTTTTCGCTCACTCCTTTTTTTGATGACTTTGACCTTTGGTTTTAAATTTTTGAAAAAAATAAAAAATAGGCGAAGCCTATATCTATTTATCATATATATTTTAATCTTTTGTTCTTTTGCGTGAAAAAAATGTCAGTGGTAGTAAGGCTATAAAGATTTTTAAGGACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATAAGGACAGAAAAAGTTGAATTACTGTCCTTATTTTGATATAATAAAAGCATAGAGAAATTTACTCGCTAAAGTCTTTCTCTATGCCTACTTAAAATCACTCACAAAGGAGTAACTCTCT
AT-rich region
The information of repeat sequences

Motif CGATGTATAAGGACAGAAAAA

StartP-valueSite
13571.06e-12ACAGAAAAATCGATGTATAAGGACAGAAAAAGTTGAATTAC
13351.06e-12ACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATA
13131.06e-12ACAGAAAAATCGATGTATAAGGACAGAAAAATCGATGTATA
12911.98e-11AAGGCTATAAAGATTTTTAAGGACAGAAAAATCGATGTATA

Motif ADGGGTARKTGRGRHTTGCVC

StartP-valueSite
9476.25e-10TTTTCCATTTAAGGGTTGTTAGGGCTTGCCCTGACCGTCTG
2821.91e-09TTTTTATAAAATGGGTAGGTGGCGTTTGCGTAAAGCAAATC
3352.51e-09AGGGGATAAAAGGGGAAAGTGAAACTTCCCCCTTTTCAAGC
6902.75e-09AATTTATTTGATGTGTAAGTGCGCATTGCACTCTTTTTTTA
5002.86e-08ATCAATGACAAAGGGCGATTGAGAAATGAGCGCTGGGGCAT

Motif GDTTTTGMYCWTTBBWTTT

StartP-valueSite
11371.34e-09TGTGAGCGTGGTTTTCGCTCACTCCTTTTTTTGATGACT
10756.77e-09TCCTAAAAGCGGTTTTGATCTTTTCTTTTAGCGAGTGAA
7542.27e-08AAACTTTTTAGTTTTTCATCATTCTATTTTAAAACGTTC
2564.00e-08AAAAGAAAGATCTTTTGCCCATTTTATTTTTATAAAATG
11625.12e-08TTTTTTTGATGACTTTGACCTTTGGTTTTAAATTTTTGA
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000208 100.0 1483 0 0 1 1483 1 1483 0.0 2736
pORI00000208 95.238 42 2 0 1336 1377 1292 1333 6.68e-12 68
pORI00000208 95.238 42 2 0 1292 1333 1336 1377 6.68e-12 68
pORI00000007 93.356 1490 63 31 1 1474 1 1470 0.0 2170
pORI00000378 92.121 1485 86 23 1 1474 1 1465 0.0 2065
pORI00000078 92.436 1441 78 27 1 1422 1 1429 0.0 2028
pORI00000507 96.354 1097 33 7 1 1093 1 1094 0.0 1797
pORI00000507 83.492 315 42 9 1165 1476 1092 1399 0.0 285
pORI00000397 94.502 582 27 4 454 1032 1534 955 0.0 893
pORI00000397 75.479 261 59 5 1165 1422 320 62 1.41e-28 122
pORI00000797 81.928 332 47 12 1152 1476 331 6 0.0 268
pORI00000376 85.321 218 32 0 938 1155 495 712 0.0 226
pORI00000349 82.197 264 31 15 1165 1422 1139 1392 0.0 213
pORI00000790 79.697 330 36 20 1152 1476 1192 1495 0.0 209
pORI00000848 77.994 309 39 26 1186 1479 299 5 6.40954e-42 167
pORI00000849 81.951 205 26 11 1165 1365 422 619 8.28994e-41 163
pORI00000532 81.951 205 26 11 1165 1365 624 821 8.28994e-41 163
pORI00000408 81.951 205 26 11 1165 1365 422 619 8.28994e-41 163
pORI00000847 86.567 134 11 7 1165 1296 267 395 3.88e-34 141
pORI00000375 91.667 96 6 2 1064 1158 426 332 2.34e-31 132
pORI00000123 91.566 83 6 1 1074 1156 92 173 8.47e-26 113
pORI00000934 96.97 66 2 0 1091 1156 551 616 3.04e-25 111
pORI00000982 75.547 274 38 27 1195 1452 292 32 3.94e-24 108
pORI00000172 90.361 83 7 1 1074 1156 440 521 3.94e-24 108
pORI00000260 73.529 272 54 17 1195 1456 203 466 5.13e-18 88
pORI00000739 93.182 44 3 0 944 987 558 515 2.4e-11 66