RefSeq NC_003486
DoriC accession number pORI00000244
OriC length 1652 nt
OriC AT content 0.5266
The location of oriC region 974..2625 nt
Browse in NCBI
OriC map
OriC sequences
AAGGTTATATCCATTTAGAAAAAATAGGATTTTTCCCTTTTTAAGGCGAATCAGCAATAGAAACTTTATGTCTCCGTGGTGGGTATACAAAATTTACGGAGAGCGTAGCGACCGTCGCACAGTTCGGTTCTTTCCTTTCGTGCCGCAACTGGCTTGATTCTGTGGTGGTGGTGGCTGCTGCTATGTCTCATATACTCTTGGCGTTGCAATCCTTTATCCCATATCTGTCGAATATCACAGATGATCTTCTTGAGATCCTGTCCGTTGCGTCGTAATCTCTTTCTCTGGAAACGAAAAAACCGCCCTGCAAGGCGGTTTTTCGAAGGTTCTCAGAGCTACCAACTCTTTGAACCGCGGTAACTGGCTTGGAGGAACGCAGTAACCAAATCTGTCCTTTCAGTTTAGCCTTAACCGGCGCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTTGCATGTCTTTCCGGGTTGGACTCAAGATGATAGTTACCGGACAAGGCGCAGCGGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCCGATTCTGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACGCCGTATCCTTTTTCCACCCTTCCTGATTTCCGCTTAGTCTCTTTATCCAGCCATTCGTGAGCTGGTAACGCCCGCCGCAGTCTCACGGCAGGAGCACAGCGACCGAATGAGCGAAGAAGCGTCATATCACCGTAACCTCTATTTTCTCCTGTACGCTCTAGCGCTGCATTTTCCCTCTGCCATATGAAGCACTTTCGCGAAGTGTTACTCCTCCGTAACATATTTAGCCCGTGTACACTCTGCTAGTGTTACATGACTGATTCAGGGCTGCGCCCCGAAACCCGCTAACAACCCCTTAGCTACTGGATATCACCCCATGCCATCTGAATATGATGAACAACGGGATGCGACTGATACGCAGCTTCCCGGCGAATATGACCTTTTTGATTTAATGGCGCAGGTTACTGAAGAGAACCTGCATGCCCCGGTGGATTTTGGCCCGCCTGTCGGCAGGGAAGCGTTATAACTTTTTTCGCTGGTCAGCGTACGTGTAATACGCCGGTATTACATCTTATTTCTTTATTTTCATGTGATTACAGGTGGTTGTAATACGTTGCGTATTACATAAATAAACGGGAAATTCAGTTTTTACCTTTTAATTCATGCAATTGCGATGAAAATCGCGGTTGCGTATGGTGTATGGCCATTTAAGGGATAATGTAACCTGACTTTTAAAGAATGAATCTATCTTTGGCAGCGCATGAGATCGATAAAAAGCGTTCCACATCAGGCGGTTCATGGATACATGAACCGGAAAGGACAAAAATAAGACAATTGTAAGACATTTTTTGCGTTTTACTCTTATTTTTGGACTATTATGAGACAAATGTAAGACATTATGGGCGGTAT
AAGGTTATATCCATTTAGAAAAAATAGGATTTTTCCCTTTTTAAGGCGAATCAGCAATAGAAACTTTATGTCTCCGTGGTGGGTATACAAAATTTACGGAGAGCGTAGCGACCGTCGCACAGTTCGGTTCTTTCCTTTCGTGCCGCAACTGGCTTGATTCTGTGGTGGTGGTGGCTGCTGCTATGTCTCATATACTCTTGGCGTTGCAATCCTTTATCCCATATCTGTCGAATATCACAGATGATCTTCTTGAGATCCTGTCCGTTGCGTCGTAATCTCTTTCTCTGGAAACGAAAAAACCGCCCTGCAAGGCGGTTTTTCGAAGGTTCTCAGAGCTACCAACTCTTTGAACCGCGGTAACTGGCTTGGAGGAACGCAGTAACCAAATCTGTCCTTTCAGTTTAGCCTTAACCGGCGCATAACTTCAAGACTAACTCCTCTAAATCAGTTACCAGTGGCTGCTGCCAGTGGCGCTTTTGCATGTCTTTCCGGGTTGGACTCAAGATGATAGTTACCGGACAAGGCGCAGCGGTCGGACTGAACGGGGGGTTCGTGCATACAGTCCAGCTTGGAGCGAACTGCCTACCCGGAACTGAGTGTCAGGCGTGGAATGAGATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAAAGGCAGGAACAGGAGAGCGCACGAGGGAGCCACCAGGGGGAAACGCCTGGTATCTTTAAGTCCTGTCGGGTTTCGCCACCACTGATTTGAGCGTCCGATTCTGTGATGCTTGTCAGGGGGGCGGAGCCTATGGAAAAACGGCAACGCCGTATCCTTTTTCCACCCTTCCTGATTTCCGCTTAGTCTCTTTATCCAGCCATTCGTGAGCTGGTAACGCCCGCCGCAGTCTCACGGCAGGAGCACAGCGACCGAATGAGCGAAGAAGCGTCATATCACCGTAACCTCTATTTTCTCCTGTACGCTCTAGCGCTGCATTTTCCCTCTGCCATATGAAGCACTTTCGCGAAGTGTTACTCCTCCGTAACATATTTAGCCCGTGTACACTCTGCTAGTGTTACATGACTGATTCAGGGCTGCGCCCCGAAACCCGCTAACAACCCCTTAGCTACTGGATATCACCCCATGCCATCTGAATATGATGAACAACGGGATGCGACTGATACGCAGCTTCCCGGCGAATATGACCTTTTTGATTTAATGGCGCAGGTTACTGAAGAGAACCTGCATGCCCCGGTGGATTTTGGCCCGCCTGTCGGCAGGGAAGCGTTATAACTTTTTTCGCTGGTCAGCGTACGTGTAATACGCCGGTATTACATCTTATTTCTTTATTTTCATGTGATTACAGGTGGTTGTAATACGTTGCGTATTACATAAATAAACGGGAAATTCAGTTTTTACCTTTTAATTCATGCAATTGCGATGAAAATCGCGGTTGCGTATGGTGTATGGCCATTTAAGGGATAATGTAACCTGACTTTTAAAGAATGAATCTATCTTTGGCAGCGCATGAGATCGATAAAAAGCGTTCCACATCAGGCGGTTCATGGATACATGAACCGGAAAGGACAAAAATAAGACAATTGTAAGACATTTTTTGCGTTTTACTCTTATTTTTGGACTATTATGAGACAAATGTAAGACATTATGGGCGGTAT
AT-rich region
The information of repeat sequences

Motif CCATAGMWRCBKNATRTCACCG

StartP-valueSite
6267.74e-11ATAAACGCGGCCATAACAGCGGAATGACACCGGTAAACCGAA
10977.00e-10GCTAACAACCCCTTAGCTACTGGATATCACCCCATGCCATCT
9142.06e-09GACCGAATGAGCGAAGAAGCGTCATATCACCGTAACCTCTAT
2192.22e-09ATCCTTTATCCCATATCTGTCGAATATCACAGATGATCTTCT
552.77e-09GGCGAATCAGCAATAGAAACTTTATGTCTCCGTGGTGGGTAT

Motif GAAACGCRGTAAC

StartP-valueSite
3719.60e-08CTGGCTTGGAGGAACGCAGTAACCAAATCTGTC
3491.84e-07CCAACTCTTTGAACCGCGGTAACTGGCTTGGAG
6553.14e-07CCGGTAAACCGAAAGGCAGGAACAGGAGAGCGC
10807.78e-07GCTGCGCCCCGAAACCCGCTAACAACCCCTTAG
2881.19e-06TCTTTCTCTGGAAACGAAAAAACCGCCCTGCAA

Motif AATWCRDTTTTTNCCTTT

StartP-valueSite
13828.52e-10ATAAACGGGAAATTCAGTTTTTACCTTTTAATTCATGC
231.73e-08ATTTAGAAAAAATAGGATTTTTCCCTTTTTAAGGCGAA
1212.36e-08ACCGTCGCACAGTTCGGTTCTTTCCTTTCGTGCCGCAA
15823.03e-08AGACAATTGTAAGACATTTTTTGCGTTTTACTCTTATT
13071.59e-07ATACGCCGGTATTACATCTTATTTCTTTATTTTCATGT
The result of BLAST Download

subject_id identity aln_length mismatches gaps q_start q_end s_start s_end e_value bit_score
pORI00000244 100.0 1652 0 0 1 1652 1 1652 0.0 3051
pORI00000098 85.194 1236 139 33 243 1452 302 1519 0.0 1229
pORI00000095 85.194 1236 139 33 243 1452 302 1519 0.0 1229
pORI00000094 82.554 1261 159 48 234 1452 1825 584 0.0 1053
pORI00000061 85.899 851 104 15 246 1088 168 1010 0.0 893
pORI00000086 85.802 817 73 33 295 1091 901 108 0.0 826
pORI00000307 84.156 871 102 26 243 1091 302 1158 0.0 811
pORI00000116 84.156 871 102 26 243 1091 302 1158 0.0 811
pORI00000056 92.857 560 35 5 243 799 3 560 0.0 808
pORI00000110 83.097 846 110 27 268 1091 2197 3031 0.0 739
pORI00000060 82.232 878 121 27 243 1097 2325 1460 0.0 725
pORI00000238 82.005 878 122 28 243 1097 263 1127 0.0 713
pORI00000314 85.47 702 81 15 771 1461 606 1297 0.0 712
pORI00000314 81.31 519 77 16 240 741 24 539 0.0 403
pORI00000075 85.47 702 81 15 771 1461 606 1297 0.0 712
pORI00000075 81.31 519 77 16 240 741 24 539 0.0 403
pORI00000043 91.667 516 35 8 290 799 187 700 0.0 708
pORI00000093 80.715 923 127 39 234 1119 909 1 0.0 671
pORI00000069 85.077 650 83 14 456 1096 3336 3980 0.0 651
pORI00000198 86.957 575 48 22 243 797 97 664 0.0 621
pORI00000111 84.37 595 63 24 243 816 52 637 0.0 556
pORI00000315 86.011 529 50 18 289 797 814 1338 0.0 545
pORI00000320 78.768 617 84 37 243 818 116 726 0.0 370
pORI00000312 78.768 617 84 37 243 818 116 726 0.0 370
pORI00000334 77.333 675 120 22 441 1099 758 101 0.0 368
pORI00000322 77.333 675 120 22 441 1099 758 101 0.0 368
pORI00000058 78.921 593 74 37 243 797 13 592 0.0 355
pORI00000112 78.356 596 82 37 243 797 974 1563 0.0 346
pORI00000309 82.857 385 45 16 450 815 271 653 0.0 326
pORI00000012 77.627 590 92 27 243 797 70 654 0.0 322
pORI00000308 82.597 385 46 16 450 815 271 653 0.0 320
pORI00000301 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000294 83.11 373 41 16 448 800 915 545 0.0 320
pORI00000292 83.11 373 41 16 448 800 915 545 0.0 320
pORI00000290 83.11 373 41 16 448 800 906 536 0.0 320
pORI00000239 83.11 373 41 16 448 800 729 359 0.0 320
pORI00000224 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000223 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000222 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000097 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000092 83.243 370 40 16 448 797 396 763 0.0 320
pORI00000343 77.647 595 82 38 243 795 997 412 0.0 315
pORI00000306 82.88 368 45 13 448 797 910 543 0.0 315
pORI00000022 82.703 370 42 17 448 797 244 611 0.0 309
pORI00000284 86.842 190 14 5 620 798 392 203 0.0 202
pORI00000234 86.842 190 14 5 620 798 392 203 0.0 202
pORI00000210 86.842 190 14 5 620 798 392 203 0.0 202
pORI00000209 86.842 190 14 5 620 798 392 203 0.0 202
pORI00001055 85.065 154 19 4 294 444 153 1 5.56e-38 154
pORI00000240 100.0 29 0 0 769 797 1015 1043 5.81e-08 55